Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5034734

Identification

Species:
Sorghum bicolor
Gene model
5034734
Description
Sb02g040790
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473862 Score: 1

Arabidopsis thaliana

AT1G46264.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g44690.1 Score: 1

Sorghum bicolor

4966952 Score: 1
5034734 Score: 1

Populus trichocarpa

557710 Score: 1
641429 Score: 1

Selaginella moellendorffii

92634 Score: 1

Sorghum bicolor

4966952 Score: 1
5034734 Score: 1

Vitis vinifera

GSVIVP00014836001 Score: 1
GSVIVP00017248001 Score: 1

Expression data

Expressed Sequence Tags

Hv.8515
HVSMEn0019E11f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019E11f, mRNA sequence /clone=HVSMEn0019E11f /gb=BI959330
Os.50643
Oryza sativa Japonica Group cDNA clone:001-123-F07, full insert sequence /cds=p(96,1028) /gb=AK063952
Os.61308
Oryza sativa Japonica Group cDNA, clone: J065120N14, full insert sequence /cds=p(114,1298) /gb=AK241190
Os.68844
73289rsicem_6705.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK067449
Pba.10851
WS01226.BR_I21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01226_I21 5', mRNA sequence /clone=WS01226_I21 /clone_end=5' /gb=DT472578
Pth.367
Populus trichocarpa clone WS0125_K14 unknown mRNA /cds=p(145,1251) /gb=EF147879

Domain Architecture

HSF_DNA-bind PF00447 5034734
DomainStartEndBit scoreE-value
HSF_DNA-bind24246138.71.9e-38

Sequences