Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5044414

Identification

Species:
Sorghum bicolor
Gene model
5044414
Description
Sb08g001980
Family
C3H
3D structure (top 5)
2QFJ 1L3K 2G4B 1QM9 1CVJ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G044004_P02 Score: 1
GRMZM2G044004_P03 Score: 1
GRMZM2G178473_P02 Score: 1
GRMZM2G178473_P03 Score: 1
GRMZM2G044004_P01 Score: 0.983
GRMZM2G178473_P01 Score: 0.983

Expression data

Expressed Sequence Tags

Hv.9817
HVSMEg0017F10f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0017F10f, mRNA sequence /clone=HVSMEg0017F10f /gb=BE455906
Pth.12941
F101P95.5pR Populus flower cDNA library Populus trichocarpa cDNA clone F101P95 5', mRNA sequence /clone=F101P95 /clone_end=5' /gb=CK101595
Vvi.12680
S1G00230 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G00230, mRNA sequence /clone=S1G00230 /gb=EE075516

Domain Architecture

zf-CCCH PF00642 5044414
DomainStartEndBit scoreE-value
zf-CCCH16118628.52.7e-05

Sequences