Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5045131

Identification

Species:
Sorghum bicolor
Gene model
5045131
Description
Sb08g016640
Family
C3H
3D structure (top 5)
1YCS 2VGE 1N11 2F8Y 2AJA
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os12g33090.1 Score: 1

Zea mays

GRMZM2G002981_P01 Score: 1
GRMZM2G027298_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.23976
HVSMEc0016D15f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0016D15f, mRNA sequence /clone=HVSMEc0016D15f /gb=BG310058
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Os.11774
Oryza sativa Japonica Group cDNA clone:001-202-E04, full insert sequence /cds=p(173,1978) /gb=AK105767
Os.74292
Oryza sativa (japonica cultivar-group) Os03g0698800 (Os03g0698800) mRNA, complete cds /cds=p(596,2890) /gb=NM_001057517
Os.80954
Oryza sativa Japonica Group cDNA, clone: J043017N22, full insert sequence /gb=AK287452
Sbi.17965
LG1_292_E12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564424

Domain Architecture

Ank PF00023 5045131
DomainStartEndBit scoreE-value
Ank548822.90.0013
Ank9012519.70.012
zf-CCCH21624222.40.0017

Sequences