Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5045723

Identification

Species:
Sorghum bicolor
Gene model
5045723
Description
Sb09g001110
Family
RB
3D structure (top 5)
2R7G 2QDJ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os11g32900.1 Score: 1

Zea mays

GRMZM2G003043_P01 Score: 1
GRMZM2G155528_P01 Score: 1
GRMZM2G156101_P01 Score: 1
GRMZM2G003043_P02 Score: 0.972
GRMZM2G156101_P02 Score: 0.972
GRMZM2G153150_P01 Score: 0.967
GRMZM2G153150_P03 Score: 0.967
GRMZM2G155528_P04 Score: 0.967

Expression data

Expressed Sequence Tags

At.14958
Arabidopsis thaliana RBR1 (RETINOBLASTOMA-RELATED 1) (RBR1) mRNA, complete cds /cds=p(261,3302) /gb=NM_112064
Hv.5609
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf83d11, mRNA sequence /gb=AK248360
Mtr.15037
AC0520 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY615451
Os.58052
Oryza sativa Japonica Group cDNA, clone: J065187G05, full insert sequence /cds=p(181,3213) /gb=AK241627
Os.87698
Oryza sativa Japonica Group cDNA clone:J023138G19, full insert sequence /gb=AK121431
Pba.4988
WS01125.BR_M14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01125_M14 5', mRNA sequence /clone=WS01125_M14 /clone_end=5' /gb=DT497201
Pth.4988
WS01125.BR_M14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01125_M14 5', mRNA sequence /clone=WS01125_M14 /clone_end=5' /gb=DT497201
Ptp.9142
Populus tremula x Populus tremuloides retinoblastoma-related protein 1 (RB1) mRNA, complete cds /cds=p(224,3331) /gb=AF133675
Vvi.17405
S5B02463 Fruits 7-9 mm treated with GA3 (VvS5) Vitis vinifera cDNA clone S5B02463, mRNA sequence /clone=S5B02463 /gb=EE086681

Domain Architecture

RB_A PF01858 5045723
DomainStartEndBit scoreE-value
RB_A2754763973.2e-116
RB_B594721223.46e-64

Sequences