Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5046899

Identification

Species:
Sorghum bicolor
Gene model
5046899
Description
Sb09g026440
Family
HSF
3D structure (top 5)
3HTS 1HKS 1C1G 2CH7 1CII
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os05g45410.1 Score: 1

Zea mays

GRMZM2G159367_P01 Score: 1

Expression data

Expressed Sequence Tags

At.5364
Arabidopsis thaliana HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor (HSF3) mRNA, complete cds /cds=p(117,1562) /gb=NM_180501
Hv.9738
HV_CEb0010C13f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0010C13f, mRNA sequence /clone=HV_CEb0010C13f /gb=BE216310
Os.40018
Oryza sativa spl7 mRNA for spl7 protein, complete cds /cds=p(358,1737) /gb=AB050098
Os.59230
Oryza sativa Japonica Group cDNA clone:J013165J23, full insert sequence /gb=AK072210
Ppa.16751
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_206139) mRNA, partial cds /cds=p(377,1177) /gb=XM_001758240
Pth.11766
F069P67Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI136536
Vvi.23635
S9B09290 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B09290, mRNA sequence /clone=S9B09290 /gb=EE101448

Domain Architecture

HSF_DNA-bind PF00447 5046899
DomainStartEndBit scoreE-value
HSF_DNA-bind26194207.82.8e-59

Sequences