Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5048886

Identification

Species:
Sorghum bicolor
Gene model
5048886
Description
Sb01g022420
Family
HB
3D structure (top 5)
1NK2 2E1O 2CUE 1JGG 2DMQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os10g26500.1 Score: 1

Sorghum bicolor

147812 Score: 1
4745673 Score: 1
5048886 Score: 1

Physcomitrella patens

234989 Score: 1
6570 Score: 1
6648 Score: 1

Zea mays

GRMZM2G097349_P01 Score: 1

Expression data

Expressed Sequence Tags

At.49022
Arabidopsis thaliana mRNA for homeobox protein, complete cds, clone: RAFL16-61-C06 /cds=p(284,1228) /gb=AK229364
At.68137
987288 CERES-148 Arabidopsis thaliana cDNA clone 147623 3', mRNA sequence /clone=147623 /clone_end=3' /gb=DR380834
Hv.12185
BES1824102g23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010G232 5-PRIME, mRNA sequence /clone=MPMGp2010G23102 /clone_end=5' /gb=CK122216
Mtr.1797
EST646165 HOGA Medicago truncatula cDNA clone HOGA-27L15, mRNA sequence /clone=HOGA-27L15 /gb=CB893373
Os.70514
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA049M06, full insert sequence /gb=CT837749

Domain Architecture

Homeobox PF00046 5048886
DomainStartEndBit scoreE-value
Homeobox12117573.76.8e-19
HALZ17622053.77.1e-13

Sequences