Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5049892

Identification

Species:
Sorghum bicolor
Gene model
5049892
Description
Sb01g042370
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Coccomyxa sp. C-169

75510 Score: 1

Micromonas sp. RCC299

108997 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g12370.1 Score: 1
LOC_Os03g12370.3 Score: 0.952
LOC_Os03g12370.2 Score: 0.948

Zea mays

GRMZM2G118485_P01 Score: 1
GRMZM2G178310_P02 Score: 1

Expression data

Expressed Sequence Tags

Mtr.22152
NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
Os.18587
Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
Os.40020
Oryza sativa Japonica Group cDNA clone:J023131M03, full insert sequence /cds=p(167,1399) /gb=AK072571
Os.9717
Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Ppa.23110
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_108327) mRNA, complete cds /cds=p(1,1224) /gb=XM_001778961
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055

Domain Architecture

HSF_DNA-bind PF00447 5049892
DomainStartEndBit scoreE-value
HSF_DNA-bind49226228.91.3e-65

Sequences