Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5050047

Identification

Species:
Sorghum bicolor
Gene model
5050047
Description
Sb01g044640
Family
bHLH
3D structure (top 5)
1HLO 1NKP 1AM9 1NLW 2QL2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

335492 Score: 1

Arabidopsis thaliana

AT1G72210.1 Score: 1

Carica papaya

evm.TU.supercontig_55.62 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g08930.1 Score: 1

Populus trichocarpa

217371 Score: 1

Sorghum bicolor

5047250 Score: 1
5050047 Score: 1

Vitis vinifera

GSVIVP00015166001 Score: 1
GSVIVP00022870001 Score: 1

Zea mays

GRMZM2G006631_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.31303
Oryza sativa Japonica Group cDNA clone:002-130-B03, full insert sequence /cds=p(106,1095) /gb=AK107555
Os.46600
Oryza sativa Japonica Group cDNA clone:001-003-C09, full insert sequence /gb=AK058809
Pba.11488
WS02549.C21_O13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_O13 3', mRNA sequence /clone=WS02549_O13 /clone_end=3' /gb=DT492192
Pth.11488
WS02549.C21_O13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_O13 3', mRNA sequence /clone=WS02549_O13 /clone_end=3' /gb=DT492192
Vvi.20015
WIN0520.C21_P17 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0520_P17 3', mRNA sequence /clone=WIN0520_P17 /clone_end=3' /gb=EC940864

Domain Architecture

HLH PF00010 5050047
DomainStartEndBit scoreE-value
HLH12717861.14.2e-15

Sequences