Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5051630

Identification

Species:
Sorghum bicolor
Gene model
5051630
Description
Sb02g032810
Family
C2H2

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473343 Score: 1

Arabidopsis thaliana

AT1G30970.1 Score: 1

Carica papaya

evm.TU.supercontig_30.97 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g38790.3 Score: 1

Physcomitrella patens

87880 Score: 1

Populus trichocarpa

830715 Score: 1

Selaginella moellendorffii

233860 Score: 1

Vitis vinifera

GSVIVP00037541001 Score: 1

Zea mays

GRMZM2G081812_P02 Score: 1

Expression data

Expressed Sequence Tags

At.25254
Arabidopsis thaliana putative zinc finger protein (At1g30970) mRNA, complete cds /cds=p(157,1260) /gb=AF360277
Hv.5193
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf137a02, mRNA sequence /gb=AK248180
Mtr.7529
EST641543 GPOD Medicago truncatula cDNA clone GPOD-36C19, mRNA sequence /clone=GPOD-36C19 /gb=CA917396
Os.8410
Oryza sativa Japonica Group cDNA clone:J013127D16, full insert sequence /cds=p(184,1251) /gb=AK067997
Pba.1121
WS0256.B21_M08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_M08 3', mRNA sequence /clone=WS0256_M08 /clone_end=3' /gb=CV245206
Ppa.13072
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_61926) mRNA, complete cds /cds=p(1,1131) /gb=XM_001785595
Pth.1121
WS0256.B21_M08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_M08 3', mRNA sequence /clone=WS0256_M08 /clone_end=3' /gb=CV245206
Sbi.16178
HS1_46_D06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_46_D06_A012 5', mRNA sequence /clone=HS1_46_D06_A012 /clone_end=5' /gb=CD209203 /gi=30943064

Domain Architecture

zf-C2H2 PF00096 5051630
DomainStartEndBit scoreE-value
zf-C2H23558190.019

Sequences