Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5052081

Identification

Species:
Sorghum bicolor
Gene model
5052081
Description
Sb02g040140
Family
bHLH
3D structure (top 5)
1AM9 1NKP 1NLW 1HLO 1A0A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os07g43530.1 Score: 1
LOC_Os07g43530.2 Score: 1

Populus trichocarpa

646081 Score: 1
667015 Score: 1

Zea mays

GRMZM2G017145_P03 Score: 1
GRMZM2G038581_P03 Score: 1

Expression data

Expressed Sequence Tags

Hv.13145
HC109G12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC109G12_T3.ab1 similar to (AC079828) bHLH transcription factor, putative [Arabidopsis thaliana], mRNA sequence /clone=HC109G12_T3.ab1 /gb=BM817155
Hv.14362
HDP36D02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP36D02, mRNA sequence /clone=HDP36D02 /gb=EX585083
Os.34549
Oryza sativa Japonica Group cDNA clone:J023068N18, full insert sequence /cds=p(249,1046) /gb=AK070963
Sbi.8330
OX1_19_D03.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_19_D03_A002 5', mRNA sequence /clone=OX1_19_D03_A002 /clone_end=5' /gb=CN134000 /gi=45965192

Domain Architecture

HLH PF00010 5052081
DomainStartEndBit scoreE-value
HLH378713.90.0058

Sequences