Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5052516

Identification

Species:
Sorghum bicolor
Gene model
5052516
Description
Sb03g003270
Family
MYB-related
3D structure (top 5)
1IRZ 2ELK 1OFC 2CRG 2CU7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G16350.1 Score: 1

Carica papaya

evm.TU.supercontig_2092.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g09280.1 Score: 1

Populus trichocarpa

645998 Score: 1

Vitis vinifera

GSVIVP00034313001 Score: 1

Zea mays

GRMZM2G099919_P02 Score: 1
GRMZM2G099919_P01 Score: 0.937

Expression data

Expressed Sequence Tags

At.35354
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-29-L19 /cds=p(63,848) /gb=AK227711
Hv.28846
HDP22M11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP22M11, mRNA sequence /clone=HDP22M11 /gb=EX574412
Mtr.14074
EST1226559 MTY Medicago truncatula cDNA clone MTYAV63, mRNA sequence /clone=MTYAV63 /gb=DW017598
Mtr.16497
EST1227431 MTY Medicago truncatula cDNA clone MTYB701, mRNA sequence /clone=MTYB701 /gb=DW018470
Mtr.3679
EST1224491 MTY Medicago truncatula cDNA clone MTYA640, mRNA sequence /clone=MTYA640 /gb=DW015530
Os.3818
Oryza sativa Japonica Group cDNA clone:J023105I20, full insert sequence /cds=p(121,1221) /gb=AK071611
Pth.10577
Populus trichocarpa clone WS01230_F05 unknown mRNA /cds=p(116,1054) /gb=EF147391
Vvi.1267
VV_PEd0010c02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV239979
Vvi.23289
VV_PEd03f02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241970

Domain Architecture

Myb_DNA-binding PF00249 5052516
DomainStartEndBit scoreE-value
Myb_DNA-binding10315044.15.6e-10

Sequences