Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5055189

Identification

Species:
Sorghum bicolor
Gene model
5055189
Description
Sb04g021490
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_28.133 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g32590.1 Score: 1

Vitis vinifera

GSVIVP00021673001 Score: 1

Zea mays

GRMZM2G059851_P01 Score: 1

Expression data

Expressed Sequence Tags

At.45813
Arabidopsis thaliana AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor (AT-HSFA3) mRNA, complete cds /cds=p(1,1239) /gb=NM_120453
Hv.21887
HS01H02T HS Hordeum vulgare subsp. vulgare cDNA clone HS01H02 5-PRIME, mRNA sequence /clone=HS01H02 /clone_end=5' /gb=BQ466741
Os.23778
Oryza sativa Japonica Group cDNA clone:J033073P11, full insert sequence /cds=p(81,1577) /gb=AK101934

Domain Architecture

HSF_DNA-bind PF00447 5055189
DomainStartEndBit scoreE-value
HSF_DNA-bind65230195.11.9e-55

Sequences