Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5056283

Identification

Species:
Sorghum bicolor
Gene model
5056283
Description
Sb05g001540
Family
C3H
3D structure (top 5)
2E5G 1WF0 3D2W 2CPF 2FY1
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G047125_P01 Score: 1

Expression data

Expressed Sequence Tags

At.33921
Arabidopsis thaliana RNA binding (AT3G63450) mRNA, complete cds /cds=p(1,1215) /gb=NM_116210
At.48687
Arabidopsis thaliana RNA recognition motif (RRM)-containing protein (AT3G21100) mRNA, complete cds /cds=p(12,1820) /gb=NM_001035661
Hv.9817
HVSMEg0017F10f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0017F10f, mRNA sequence /clone=HVSMEg0017F10f /gb=BE455906
Pth.12941
F101P95.5pR Populus flower cDNA library Populus trichocarpa cDNA clone F101P95 5', mRNA sequence /clone=F101P95 /clone_end=5' /gb=CK101595

Domain Architecture

zf-CCCH PF00642 5056283
DomainStartEndBit scoreE-value
zf-CCCH14717229.61.2e-05

Sequences