Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5057103

Identification

Species:
Sorghum bicolor
Gene model
5057103
Description
Sb06g014350
Family
C3H
3D structure (top 5)
2ADC 2GHP 1L3K 1FXL 1X4F
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

347147 Score: 1

Arabidopsis thaliana

AT3G27700.1 Score: 1
AT3G27700.2 Score: 1

Carica papaya

evm.TU.supercontig_108.53 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g32340.1 Score: 1

Physcomitrella patens

102008 Score: 1

Populus trichocarpa

258695 Score: 1

Selaginella moellendorffii

437689 Score: 1

Expression data

Expressed Sequence Tags

Os.48573
OSJNEd16L07.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA clone OSJNEd16L07 5', mRNA sequence /clone=OSJNEd16L07 /clone_end=5' /gb=CB668716
Os.88292
Oryza sativa Japonica Group cDNA clone:J023009A16, full insert sequence /cds=p(274,2985) /gb=AK111819
Os.90253
CI195262 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa (japonica cultivar-group) cDNA clone 036-M076R-G06 3', mRNA sequence /clone=036-M076R-G06 /clone_end=3' /gb=CI195262
Sbi.11150
LG1_360_G11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW672499

Domain Architecture

zf-CCCH PF00642 5057103
DomainStartEndBit scoreE-value
zf-CCCH22425018.60.0053
RRM_146052436.79.1e-08

Sequences