Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5058210

Identification

Species:
Sorghum bicolor
Gene model
5058210
Description
Sb06g034060
Family
SET
3D structure (top 5)
2F69 2R3A 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

5058210 Score: 1
5058868 Score: 1

Arabidopsis thaliana

AT5G43990.2 Score: 1.002
AT1G04050.1 Score: 1
AT5G43990.1 Score: 1
AT5G43990.3 Score: 1
AT5G43990.4 Score: 1

Populus trichocarpa

243333 Score: 1

Zea mays

GRMZM2G057692_P02 Score: 1

Expression data

Expressed Sequence Tags

Os.53850
Oryza sativa Japonica Group cDNA clone:J023086A12, full insert sequence /cds=p(195,2420) /gb=AK100391
Ppa.19113
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_3159) mRNA, partial cds /cds=p(1,966) /gb=XM_001785757
Vvi.20659
WIN0534.C21_N01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0534_N01 3', mRNA sequence /clone=WIN0534_N01 /clone_end=3' /gb=EC945442

Domain Architecture

WIYLD PF10440 5058210
DomainStartEndBit scoreE-value
WIYLD16460.18.4e-15
Pre-SET46361126.61.9e-06
SET6137571208e-33

Sequences