Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5059046

Identification

Species:
Sorghum bicolor
Gene model
5059046
Description
Sb07g026610
Family
bHLH
3D structure (top 5)
1AM9 1HLO 1NKP 1A0A 1AN4
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os08g41320.1 Score: 1

Physcomitrella patens

171809 Score: 1

Zea mays

GRMZM2G038315_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.20041
HVSMEg0019A10f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0019A10f, mRNA sequence /clone=HVSMEg0019A10f /gb=BE455695
Mtr.14730
EST5311646 GESD Medicago truncatula cDNA clone pGESD4O22 5' end, mRNA sequence /clone=pGESD4O22 /clone_end=5' /gb=BI309896
Os.10830
Oryza sativa Japonica Group cDNA clone:J023127C06, full insert sequence /gb=AK099291
Os.32526
Oryza sativa Japonica Group cDNA clone:J033148M07, full insert sequence /gb=AK103853
Os.5763
Oryza sativa Japonica Group cDNA clone:J033022O19, full insert sequence /cds=p(332,1777) /gb=AK101063
Os.87970
Oryza sativa Japonica Group cDNA clone:002-146-G10, full insert sequence /cds=p(169,960) /gb=AK108605
Os.91501
OSJNEc03C18.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA clone OSJNEc03C18 3', mRNA sequence /clone=OSJNEc03C18 /clone_end=3' /gb=CB652788
Sbi.13364
PH1_26_A04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor cDNA clone PH1_26_A04_A002 5', mRNA sequence /clone=PH1_26_A04_A002 /clone_end=5' /gb=CF430188 /gi=34442889
Sbi.9642
ANR1_13_G08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_13_G08_A002 3', mRNA sequence /clone=ANR1_13_G08_A002 /clone_end=3' /gb=CX609545 /gi=57808265
Vvi.14924
CGF1000813_E01 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0007_IVF_E01 5', mRNA sequence /clone=CAST0007_IVF_E01 /clone_end=5' /gb=CF214173

Domain Architecture

HLH PF00010 5059046
DomainStartEndBit scoreE-value
HLH20025035.12.8e-07

Sequences