Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5060718

Identification

Species:
Sorghum bicolor
Gene model
5060718
Description
Sb09g024010
Family
SET
3D structure (top 5)
2R3A 1ML9 3F9X 2RFI 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os05g41172.1 Score: 1
LOC_Os05g41172.2 Score: 1

Zea mays

GRMZM2G117458_P01 Score: 1

Expression data

Expressed Sequence Tags

At.8375
Arabidopsis thaliana SUVH1 (SUVH1) mRNA, complete cds /cds=p(363,2375) /gb=AF344444
Hv.2567
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf52h10, mRNA sequence /gb=AK249824
Hv.29295
AL506577 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY03J09T 5', mRNA sequence /clone=HY03J09 /clone_end=5' /gb=AL506577
Os.11922
Oryza sativa Japonica Group cDNA clone:J023004N15, full insert sequence /cds=p(280,2298) /gb=AK069035
Os.3123
Oryza sativa Japonica Group cDNA clone:001-026-A12, full insert sequence /gb=AK059336
Os.35901
Oryza sativa Japonica Group cDNA clone:J013002H03, full insert sequence /gb=AK065227
Os.97866
Oryza sativa Japonica Group cDNA clone:J033092A08, full insert sequence /cds=p(393,2834) /gb=AK102379
Vvi.14480
WIN1127.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1127_D07 3', mRNA sequence /clone=WIN1127_D07 /clone_end=3' /gb=EC986263

Domain Architecture

YDG_SRA PF02182 5060718
DomainStartEndBit scoreE-value
YDG_SRA212367328.21.7e-95
Pre-SET394494130.65.1e-36
SET4966521706.8e-48

Sequences