Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5061966

Identification

Species:
Sorghum bicolor
Gene model
5061966
Description
Sb10g024960
Family
C3H

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os06g43120.1 Score: 1

Zea mays

GRMZM2G012041_P01 Score: 1

Expression data

Expressed Sequence Tags

At.41648
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT1G21570) mRNA, complete cds /cds=p(1,1413) /gb=NM_102006
Hv.29470
RUS113B09r HY Hordeum vulgare subsp. vulgare cDNA clone HY02I16, mRNA sequence /clone=HY02I16 /gb=FD524654
Mtr.21570
MEUAY59TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence /clone_end=3' /gb=GE351191
Os.18758
Oryza sativa (japonica cultivar-group) Os06g0638000 (Os06g0638000) mRNA, complete cds /cds=p(1,6207) /gb=NM_001064684
Pba.6362
WS02543.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_N01 3', mRNA sequence /clone=WS02543_N01 /clone_end=3' /gb=DT490017
Pth.6362
WS02543.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_N01 3', mRNA sequence /clone=WS02543_N01 /clone_end=3' /gb=DT490017

Domain Architecture

zf-CCCH PF00642 5061966
DomainStartEndBit scoreE-value
zf-CCCH1550157719.30.0043
zf-CCCH1605162912.70.032

Sequences