Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 53898

Identification

Species:
Physcomitrella patens
Gene model
53898
Description
gw1.159.100.1
Family
CCAAT
3D structure (top 5)
2BYK 1N1J 1TZY 1F66 1ID3
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Ppa.10622
CBAX501.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens subsp. patens cDNA clone CBAX501 5', mRNA sequence /clone=CBAX501 /clone_end=5' /gb=FC448254
Ppa.16099
DC956879 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs1n10 3', mRNA sequence /clone=ppgs1n10 /clone_end=3' /gb=DC956879
Ppa.2519
DC936519 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs22k02 5', mRNA sequence /clone=ppgs22k02 /clone_end=5' /gb=DC936519

Domain Architecture

Histone PF00125 53898
DomainStartEndBit scoreE-value
Histone17237.83.9e-08
CBFD_NFYB_HMF56992.11.8e-24
NF-YC881172.51.8e-51

Sequences