Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 557710

Identification

Species:
Populus trichocarpa
Gene model
557710
Description
eugene3.00090970
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

4966952 Score: 1
5034734 Score: 1

Populus trichocarpa

557710 Score: 1
641429 Score: 1

Expression data

Expressed Sequence Tags

At.49954
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX814533
Mtr.18292
NF091C11FL1F1085 Developing flower Medicago truncatula cDNA clone NF091C11FL 5', mRNA sequence /clone=NF091C11FL /clone_end=5' /gb=BI272767
Os.50643
Oryza sativa Japonica Group cDNA clone:001-123-F07, full insert sequence /cds=p(96,1028) /gb=AK063952
Os.61308
Oryza sativa Japonica Group cDNA, clone: J065120N14, full insert sequence /cds=p(114,1298) /gb=AK241190
Os.68844
73289rsicem_6705.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK067449
Pba.10851
WS01226.BR_I21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01226_I21 5', mRNA sequence /clone=WS01226_I21 /clone_end=5' /gb=DT472578

Domain Architecture

HSF_DNA-bind PF00447 557710
DomainStartEndBit scoreE-value
HSF_DNA-bind222141621.6e-45

Sequences