Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 562064

Identification

Species:
Populus trichocarpa
Gene model
562064
Description
eugene3.00070002
Family
SET
3D structure (top 5)
2F69 2R3A 1H3I 3F9X 2RFI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlorella sp. NC64A

18588 Score: 1
35816 Score: 1

Populus trichocarpa

562064 Score: 1
585029 Score: 1

Ostreococcus tauri

4775 Score: 1

Expression data

Expressed Sequence Tags

At.25522
Arabidopsis thaliana ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) (ASHH3) mRNA, complete cds /cds=p(254,1345) /gb=NM_129978
At.26551
Arabidopsis thaliana unknown protein (At4g30860) mRNA, complete cds /cds=p(75,1568) /gb=AY050894
At.54011
Arabidopsis thaliana ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4) (ASHH4) mRNA, complete cds /cds=p(1,1059) /gb=NM_115859
Hv.12502
HDP16P06w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP16P06, mRNA sequence /clone=HDP16P06 /gb=EX582359
Hv.2514
HVSMEg0018E08f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0018E08f, mRNA sequence /clone=HVSMEg0018E08f /gb=BG345006
Os.24146
Oryza sativa Japonica Group cDNA clone:J013095J16, full insert sequence /gb=AK067083

Domain Architecture

SET PF00856 562064
DomainStartEndBit scoreE-value
SET21150191.62e-54

Sequences