Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 570810

Identification

Species:
Populus trichocarpa
Gene model
570810
Description
eugene3.00130174
Family
Jumonji

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470987 Score: 1

Arabidopsis thaliana

AT1G09060.1 Score: 1
AT1G09060.2 Score: 1
AT1G09060.3 Score: 1

Carica papaya

evm.TU.supercontig_48.75 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g22540.1 Score: 1

Sorghum bicolor

5049432 Score: 1

Zea mays

GRMZM2G128505_P01 Score: 1

Expression data

Expressed Sequence Tags

At.10382
Arabidopsis thaliana mRNA for GF14 Kappa isoform, complete cds, clone: RAFL14-53-N23 /cds=p(62,802) /gb=AK228019
Mtr.22891
Medicago truncatula clone MTYFT1G-I-23 unknown mRNA /cds=p(136,954) /gb=BT053647
Pba.1590
WS02514.B21.1_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_A09 3', mRNA sequence /clone=WS02514_A09 /clone_end=3' /gb=CV242061
Pth.1590
WS02514.B21.1_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_A09 3', mRNA sequence /clone=WS02514_A09 /clone_end=3' /gb=CV242061
Vvi.11982
CAP0006_IVR_F05 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0006_IVR_F05 3', mRNA sequence /clone=CAP0006_IVR_F05 /clone_end=3' /gb=CF519154
Vvi.2997
CA12EI302IF_E11 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI302IF_E11 5', mRNA sequence /clone=CA12EI302IF_E11 /clone_end=5' /gb=CA816066

Domain Architecture

WRC PF08879 570810
DomainStartEndBit scoreE-value
WRC186378.32.6e-20
JmjC779886-2.70.0012

Sequences