Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 571283

Identification

Species:
Populus trichocarpa
Gene model
571283
Description
eugene3.00130647
Family
HB
3D structure (top 5)
2CUF 1JGG 2DMS 2R5Y 2DA6
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

477611 Score: 1

Populus trichocarpa

571283 Score: 1
571284 Score: 1

Populus trichocarpa

571283 Score: 1
571284 Score: 1

Arabidopsis thaliana

AT3G03660.1 Score: 1
AT3G03660.2 Score: 0.941

Populus trichocarpa

571283 Score: 1
571284 Score: 1

Carica papaya

evm.TU.supercontig_73.3 Score: 1

Populus trichocarpa

571283 Score: 1
571284 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g20910.1 Score: 1

Populus trichocarpa

571283 Score: 1
571284 Score: 1
809560 Score: 1

Zea mays

GRMZM2G016800_P02 Score: 1
GRMZM2G067003_P02 Score: 1
GRMZM2G162481_P02 Score: 1

Expression data

Expressed Sequence Tags

At.31506
Arabidopsis thaliana WOX12 (WUSCHEL RELATED HOMEOBOX 12); DNA binding / transcription factor (WOX12) mRNA, complete cds /cds=p(74,880) /gb=NM_121787
At.40942
02-L020914-065-003-B01-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 003-B01, mRNA sequence /clone=003-B01 /gb=DR751523
Mtr.22709
Medicago truncatula clone MTYFH_FI_FJ_FK1G-A-9 unknown mRNA /cds=p(71,889) /gb=BT052846
Os.51714
Oryza sativa Japonica Group cDNA clone:J033021B15, full insert sequence /cds=p(106,894) /gb=AK073232

Domain Architecture

Homeobox PF00046 571283
DomainStartEndBit scoreE-value
Homeobox238448.62.2e-11

Sequences