Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 576364

Identification

Species:
Populus trichocarpa
Gene model
576364
Description
eugene3.00160499
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

321853 Score: 1

Arabidopsis thaliana

AT2G41690.1 Score: 1

Carica papaya

evm.TU.supercontig_224.11 Score: 1

Expression data

Expressed Sequence Tags

At.53095
Arabidopsis thaliana AT-HSFB3 (Arabidopsis thaliana heat shock transcription factor B3); DNA binding / transcription factor (AT-HSFB3) mRNA, complete cds /cds=p(1,735) /gb=NM_129732
Mtr.11180
EST669152 MTUS Medicago truncatula cDNA clone MTUS-7H4, mRNA sequence /clone=MTUS-7H4 /gb=CF068431
Pba.5285
WS02553.C21_G08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_G08 3', mRNA sequence /clone=WS02553_G08 /clone_end=3' /gb=DT493098
Pth.5285
WS02553.C21_G08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_G08 3', mRNA sequence /clone=WS02553_G08 /clone_end=3' /gb=DT493098

Domain Architecture

HSF_DNA-bind PF00447 576364
DomainStartEndBit scoreE-value
HSF_DNA-bind17196162.11.5e-45

Sequences