Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 58625

Identification

Species:
Micromonas sp. RCC299
Gene model
58625
Description
EuGene.0500010358
Family
C3H
3D structure (top 5)
1Z47 3G5U 2NQ2 1V43 2ZU0
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Expression data

Expressed Sequence Tags

At.9321
Arabidopsis thaliana ATGCN1 (Arabidopsis thaliana general control non-repressible 1) (ATGCN1) mRNA, complete cds /cds=p(98,1885) /gb=NM_125472
Cre.4132
Chlamydomonas reinhardtii flagellar associated protein (FAP151) mRNA, complete cds /cds=p(174,1979) /gb=XM_001699475
Hv.803
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf123o02, mRNA sequence /gb=AK251611
Hv.9700
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf164b03, mRNA sequence /gb=AK252718
Os.38157
Oryza sativa Japonica Group cDNA clone:J023004J15, full insert sequence /gb=AK069041
Os.91490
Oryza sativa Japonica Group cDNA clone:001-113-A02, full insert sequence /cds=p(60,1838) /gb=AK063258
Ppa.13927
Physcomitrella patens subsp. patens ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF2 (ppabcf2) mRNA, complete cds /cds=p(422,2215) /gb=XM_001779643
Ppa.4023
Physcomitrella patens subsp. patens ATP-binding cassette transporter, subfamily F, member 4 protein PpABCF4 (ppabcf4) mRNA, complete cds /cds=p(403,2196) /gb=XM_001757491
Ppa.5755
Physcomitrella patens subsp. patens ATP-binding cassette transporter, subfamily F, member 3 protein PpABCF3 (ppabcf3) mRNA, complete cds /cds=p(153,1946) /gb=XM_001774811
Pth.16980
Populus trichocarpa clone WS0125_O14 unknown mRNA /cds=p(561,773) /gb=EF147909

Domain Architecture

zf-CCCH PF00642 58625
DomainStartEndBit scoreE-value
zf-CCCH1091359.50.086
ABC_tran633825132.71.2e-36
ABC_tran9471117170.45.1e-48

Sequences