Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 60493

Identification

Species:
Physcomitrella patens
Gene model
60493
Description
fgenesh1_pm.scaffold_251000006
Family
Orphans
3D structure (top 5)
2JUN
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

490675 Score: 1

Sorghum bicolor

5055894 Score: 1

Expression data

Expressed Sequence Tags

Ppa.14125
CAYZ24588.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ24588 5', mRNA sequence /clone=CAYZ24588 /clone_end=5' /gb=FC401413
Ppa.5900
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_102189) mRNA, complete cds /cds=p(1,1572) /gb=XM_001785858
Ppa.6722
DC943534 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. patens cDNA clone ppgs32m20 5', mRNA sequence /clone=ppgs32m20 /clone_end=5' /gb=DC943534

Domain Architecture

zf-B_box PF00643 60493
DomainStartEndBit scoreE-value
zf-B_box14720.10.001
zf-B_box519852.61.4e-12

Sequences