Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 60640

Identification

Species:
Selaginella moellendorffii
Gene model
60640
Description
gw1.4.926.1
Family
PHD
3D structure (top 5)
3BIY 1TOT
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_818.3 Score: 1

Populus trichocarpa

199022 Score: 1

Expression data

Expressed Sequence Tags

At.21902
Arabidopsis thaliana HAC12 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 12); H3/H4 histone acetyltransferase/ transcription cofactor (HAC12) mRNA, complete cds /cds=p(250,5370) /gb=NM_101532
At.21972
Arabidopsis thaliana HAC1 (P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2 GENE); H3/H4 histone acetyltransferase/ transcription cofactor (HAC1) mRNA, complete cds /cds=p(411,5504) /gb=NM_106550
At.26162
Arabidopsis thaliana ATHPCAT2/HAC4 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 4); histone acetyltransferase (ATHPCAT2/HAC4) mRNA, complete cds /cds=p(1,4371) /gb=NM_104475
At.39511
Arabidopsis thaliana ATHPCAT4/HAC5 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5); H3/H4 histone acetyltransferase/ histone acetyltransferase (ATHPCAT4/HAC5) mRNA, complete cds /cds=p(1,5013) /gb=NM_112135
Os.59276
Oryza sativa (japonica cultivar-group) Os02g0137500 (Os02g0137500) mRNA, complete cds /cds=p(1,5007) /gb=NM_001052365
Os.80423
Oryza sativa (japonica cultivar-group) Os06g0704800 (Os06g0704800) mRNA, complete cds /cds=p(1,4320) /gb=NM_001065047
Ppa.20399
Physcomitrella patens subsp. patens p300/CBP acetyltransferase-related protein (HAC1501) mRNA, partial cds /cds=p(1,4851) /gb=XM_001775523
Ppa.25097
Physcomitrella patens subsp. patens p300/CBP acetyltransferase-related protein (HAC1502) mRNA, partial cds /cds=p(1,3246) /gb=XM_001785305

Domain Architecture

PHD PF00628 60640
DomainStartEndBit scoreE-value
PHD11816926.33.4e-05
DUF9061774385795.3e-171

Sequences