Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 62212

Identification

Species:
Selaginella moellendorffii
Gene model
62212
Description
gw1.1.1274.1
Family
C3H
3D structure (top 5)
2VGE 1YCS 1N11 3DEO 2AJA
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488102 Score: 1

Arabidopsis thaliana

AT2G41900.1 Score: 1

Carica papaya

evm.TU.supercontig_112.7 Score: 1

Micromonas pusilla CCMP1545

67715 Score: 1

Ostreococcus lucimarinus

24342 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g49170.1 Score: 1
LOC_Os03g49170.3 Score: 0.967

Ostreococcus tauri

23564 Score: 1

Populus trichocarpa

560536 Score: 1

Sorghum bicolor

4868336 Score: 1

Vitis vinifera

GSVIVP00025561001 Score: 1
GSVIVP00028802001 Score: 1

Zea mays

GRMZM2G180979_P01 Score: 1
GRMZM2G180979_P02 Score: 1
GRMZM2G024061_P01 Score: 0.92

Expression data

Expressed Sequence Tags

Hv.23976
HVSMEc0016D15f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0016D15f, mRNA sequence /clone=HVSMEc0016D15f /gb=BG310058
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Sbi.17965
LG1_292_E12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564424
Vvi.19078
VV_PEd01a07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241477

Domain Architecture

Ank PF00023 62212
DomainStartEndBit scoreE-value
Ank437616.20.14
Ank7811325.20.00027
zf-CCCH24527029.71.2e-05

Sequences