Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 63548

Identification

Species:
Micromonas sp. RCC299
Gene model
63548
Description
EuGene.1300010198
Family
SET
3D structure (top 5)
2R3A 2RFI 3H6L 1MVH 3BO5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481208 Score: 1

Arabidopsis thaliana

AT2G23380.1 Score: 1

Cyanidioschyzon merolae

CMQ156C Score: 1

Oryza sativa subsp. japonica

LOC_Os06g16390.1 Score: 1

Populus trichocarpa

818400 Score: 1

Sorghum bicolor

4896633 Score: 1

Selaginella moellendorffii

446978 Score: 1
111860 Score: 0.97

Vitis vinifera

GSVIVP00028115001 Score: 1

Zea mays

GRMZM2G137866_P02 Score: 1

Expression data

Expressed Sequence Tags

At.22
Arabidopsis thaliana CLF (CURLY LEAF); transcription factor (CLF) mRNA, complete cds /cds=p(1,2709) /gb=NM_127902
Hv.20522
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf111g10, mRNA sequence /gb=AK251149
Os.44686
Oryza sativa (japonica cultivar-group) Os06g0275500 (Os06g0275500) mRNA, complete cds /cds=p(294,2984) /gb=NM_001063914
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Ppa.1646
Physcomitrella patens subsp. patens polycomb group protein (SDG1501) mRNA, complete cds /cds=p(165,2843) /gb=XM_001768136
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.5102
WS0256.B21_F07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_F07 3', mRNA sequence /clone=WS0256_F07 /clone_end=3' /gb=CV245041

Domain Architecture

SET PF00856 63548
DomainStartEndBit scoreE-value
SET9671095145.22e-40

Sequences