Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 65143

Identification

Species:
Physcomitrella patens
Gene model
65143
Description
fgenesh1_pg.scaffold_5000007
Family
Trihelix

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_19.151 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Sorghum bicolor

4879562 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.986
GRMZM2G178791_P02 Score: 0.986

Expression data

Expressed Sequence Tags

Ppa.15840
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_173640) mRNA, complete cds /cds=p(258,2084) /gb=XM_001785760
Ppa.25901
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_65143) mRNA, complete cds /cds=p(1,1272) /gb=XM_001752530

Domain Architecture

trihelix trihelix 65143
DomainStartEndBit scoreE-value
trihelix178151.64.4e-15

Sequences

protein sequence
transcript sequence