Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 651568

Identification

Species:
Populus trichocarpa
Gene model
651568
Description
grail3.0002026401
Family
bZIP
3D structure (top 5)
1T2K 1GU4 1HJB 1JNM 1CI6
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

494588 Score: 1

Arabidopsis thaliana

AT5G44080.1 Score: 1

Carica papaya

evm.TU.supercontig_21.201 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g64730.1 Score: 1

Sorghum bicolor

5054084 Score: 1

Vitis vinifera

GSVIVP00031758001 Score: 1

Expression data

Expressed Sequence Tags

At.26664
Arabidopsis thaliana mRNA for G-box binding bZip transcription factor GBF4 / AtbZip40, complete cds, clone: RAFL15-22-N05 /cds=p(131,943) /gb=AK228531
At.71149
Arabidopsis thaliana ATPCS2 (PHYTOCHELATIN SYNTHASE 2); glutathione gamma-glutamylcysteinyltransferase (ATPCS2) mRNA, complete cds /cds=p(238,1596) /gb=NM_100279
Mtr.6990
EST640230 MTUS Medicago truncatula cDNA clone MTUS-54F7, mRNA sequence /clone=MTUS-54F7 /gb=CA922512
Pba.575
WS0122.BR_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0122_E17 5', mRNA sequence /clone=WS0122_E17 /clone_end=5' /gb=DT471852
Pth.575
WS0122.BR_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0122_E17 5', mRNA sequence /clone=WS0122_E17 /clone_end=5' /gb=DT471852
Vvi.20063
WIN024.C21_P13 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN024_P13 3', mRNA sequence /clone=WIN024_P13 /clone_end=3' /gb=EC924310

Domain Architecture

bZIP_1 PF00170 651568
DomainStartEndBit scoreE-value
bZIP_123029347.35.4e-11
bZIP_223028440.84.8e-09

Sequences