Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 658643

Identification

Species:
Populus trichocarpa
Gene model
658643
Description
grail3.0006011701
Family
C3H
3D structure (top 5)
2RPP 2E5S 3D2N 3D2Q 2RHK
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484140 Score: 1

Selaginella moellendorffii

441325 Score: 1

Expression data

Expressed Sequence Tags

Pba.5881
WS02547.C21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02547_H24 3', mRNA sequence /clone=WS02547_H24 /clone_end=3' /gb=DT491354
Pba.6743
WS02537.B21_L01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_L01 3', mRNA sequence /clone=WS02537_L01 /clone_end=3' /gb=DT488876
Pth.12309
WS02547.C21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02547_H24 3', mRNA sequence /clone=WS02547_H24 /clone_end=3' /gb=DT491354
Pth.6743
WS02537.B21_L01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_L01 3', mRNA sequence /clone=WS02537_L01 /clone_end=3' /gb=DT488876

Domain Architecture

zf-CCCH PF00642 658643
DomainStartEndBit scoreE-value
zf-CCCH2653130.026
zf-CCCH578130.55
zf-CCCH11714229.89.8e-06

Sequences