Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 662091

Identification

Species:
Populus trichocarpa
Gene model
662091
Description
grail3.0015022001
Family
C2H2
3D structure (top 5)
1UBD 2JP9 2CSH 1TF6 2I13
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G130627_P01 Score: 1.02
GRMZM2G037181_P01 Score: 1

Expression data

Expressed Sequence Tags

At.10092
Arabidopsis thaliana ELF6 (EARLY FLOWERING 6); transcription factor (ELF6) mRNA, complete cds /cds=p(1,4023) /gb=NM_120506
Hv.13928
HWM009.D11 ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM009.D11, mRNA sequence /clone=HWM009.D11 /gb=BE421450
Os.48706
Oryza sativa (japonica cultivar-group) Os12g0279100 (Os12g0279100) mRNA, complete cds /cds=p(164,4264) /gb=NM_001073104
Os.52727
Oryza sativa Japonica Group cDNA clone:J023001N18, full insert sequence /gb=AK068952
Ppa.20331
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_167193) mRNA, complete cds /cds=p(1,6099) /gb=XM_001771491
Pth.12495
UM58TD12.3pR Populus female catkins cDNA library Populus trichocarpa cDNA clone UM58TD12 3', mRNA sequence /clone=UM58TD12 /clone_end=3' /gb=DN491069

Domain Architecture

zf-C2H2 PF00096 662091
DomainStartEndBit scoreE-value
zf-C2H263165621.20.0037
zf-C2H268470820.70.0056
zf-C2H271474022.60.0015

Sequences