Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 67495

Identification

Species:
Physcomitrella patens
Gene model
67495
Description
fgenesh1_pg.scaffold_15000027
Family
HB
3D structure (top 5)
2H1K 2R5Y 1JGG 2DJN 2ECB
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

494576 Score: 1

Arabidopsis thaliana

AT5G44180.1 Score: 1

Chlorella sp. NC64A

56599 Score: 1

Carica papaya

evm.TU.supercontig_27.2 Score: 1

Coccomyxa sp. C-169

82237 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g48820.1 Score: 1

Populus trichocarpa

216338 Score: 1

Sorghum bicolor

5036401 Score: 1

Selaginella moellendorffii

447019 Score: 1

Vitis vinifera

GSVIVP00018645001 Score: 1

Zea mays

GRMZM2G000139_P01 Score: 1
GRMZM2G125294_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.16581
BJ473219 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal41c06 5', mRNA sequence /clone=baal41c06 /clone_end=5' /gb=BJ473219
Ppa.25142
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_67495) mRNA, complete cds /cds=p(1,6759) /gb=XM_001754825

Domain Architecture

Homeobox PF00046 67495
DomainStartEndBit scoreE-value
Homeobox31236871.33.2e-18
DDT91096980.94.1e-21

Sequences