Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 717386

Identification

Species:
Populus trichocarpa
Gene model
717386
Description
estExt_Genewise1_v1.C_LG_VI1602
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.53095
Arabidopsis thaliana AT-HSFB3 (Arabidopsis thaliana heat shock transcription factor B3); DNA binding / transcription factor (AT-HSFB3) mRNA, complete cds /cds=p(1,735) /gb=NM_129732
Mtr.11180
EST669152 MTUS Medicago truncatula cDNA clone MTUS-7H4, mRNA sequence /clone=MTUS-7H4 /gb=CF068431
Pba.5285
WS02553.C21_G08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_G08 3', mRNA sequence /clone=WS02553_G08 /clone_end=3' /gb=DT493098
Pth.5285
WS02553.C21_G08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_G08 3', mRNA sequence /clone=WS02553_G08 /clone_end=3' /gb=DT493098

Domain Architecture

HSF_DNA-bind PF00447 717386
DomainStartEndBit scoreE-value
HSF_DNA-bind17196157.34.3e-44

Sequences