Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 7235

Identification

Species:
Physcomitrella patens
Gene model
7235
Description
gw1.29.10.1
Family
HB
3D structure (top 5)
2CUF 2DMS 2R5Y 2DA6 1PUF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Physcomitrella patens

7235 Score: 1
7275 Score: 1

Arabidopsis thaliana

AT1G20700.1 Score: 1
AT4G35550.1 Score: 1

Micromonas sp. RCC299

59370 Score: 1

Ostreococcus lucimarinus

27102 Score: 1

Ostreococcus tauri

36163 Score: 1

Physcomitrella patens

7235 Score: 1
7275 Score: 1

Expression data

Expressed Sequence Tags

At.41695
76-L022148-065-007-D10-SeLB MPIZ-ADIS-065f Arabidopsis thaliana cDNA clone 007-D10, mRNA sequence /clone=007-D10 /gb=DR751560
Mtr.10477
EST402719 KV1 Medicago truncatula cDNA clone pKV1-2J20, mRNA sequence /clone=pKV1-2J20 /gb=BE202697
Mtr.4297
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-14 unknown mRNA /cds=p(183,977) /gb=BT052569
Os.24893
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244H01, full insert sequence /gb=CT829377
Ppa.3138
DC921897 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp. patens cDNA clone ppaa20b05 3', mRNA sequence /clone=ppaa20b05 /clone_end=3' /gb=DC921897
Ptp.135
Populus tremula X Populus tremuloides mRNA for homeodomain protein HB1 /cds=p(137,790) /gb=AJ010810
Ptp.9520
Populus tremula X Populus tremuloides mRNA for Homeodomain protein HB2, partial /cds=p(1,787) /gb=AJ010811
Vvi.4480
S1G01859 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G01859, mRNA sequence /clone=S1G01859 /gb=EE076126

Domain Architecture

Homeobox PF00046 7235
DomainStartEndBit scoreE-value
Homeobox6012168.81.8e-17

Sequences