Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 730132

Identification

Species:
Populus trichocarpa
Gene model
730132
Description
estExt_Genewise1_v1.C_LG_XIII2348
Family
SWI/SNF-BAF60b
3D structure (top 5)
1V31 1V32 1UHR 2Z5S
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

482518 Score: 1

Arabidopsis thaliana

AT2G35605.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g03730.1 Score: 1

Physcomitrella patens

130616 Score: 1

Sorghum bicolor

5054613 Score: 1

Selaginella moellendorffii

59520 Score: 1

Vitis vinifera

GSVIVP00001170001 Score: 1

Zea mays

GRMZM2G167191_P01 Score: 1

Expression data

Expressed Sequence Tags

Pth.12651
WS0123.B21_P10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0123_P10 3', mRNA sequence /clone=WS0123_P10 /clone_end=3' /gb=CV237743
Ptp.4439
T037H02 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU832755

Domain Architecture

SWIB PF02201 730132
DomainStartEndBit scoreE-value
SWIB46123114.14.3e-31

Sequences

protein sequence
transcript sequence