Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 74197

Identification

Species:
Selaginella moellendorffii
Gene model
74197
Description
e_gw1.0.1995.1
Family
MYB-related
3D structure (top 5)
2CTQ 1BQ0 3BVO 1FPO 3HHO
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478482 Score: 1

Arabidopsis thaliana

AT3G11450.1 Score: 1

Cyanidioschyzon merolae

CMA124C Score: 1

Chlamydomonas reinhardtii

298349 Score: 1

Coccomyxa sp. C-169

82454 Score: 1

Physcomitrella patens

59175 Score: 1

Populus trichocarpa

829311 Score: 1

Vitis vinifera

GSVIVP00030071001 Score: 1

Zea mays

AC191253.3_FGP045 Score: 1
AC198763.3_FGP048 Score: 1

Expression data

Expressed Sequence Tags

At.20710
Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein / cell division protein-related (AT3G11450) mRNA, complete cds /cds=p(1,1992) /gb=NM_111978
At.32898
Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein / cell division protein-related (AT5G06110) mRNA, complete cds /cds=p(1,1992) /gb=NM_120693
Mtr.9880
Medicago truncatula clone MTYFL_FM_FN_FO1G-C-13 unknown mRNA /cds=p(32,778) /gb=BT053190
Os.16983
Oryza sativa Japonica Group cDNA clone:002-104-B02, full insert sequence /gb=AK112087
Pba.5702
WS02548.C21_M17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02548_M17 3', mRNA sequence /clone=WS02548_M17 /clone_end=3' /gb=DT491791
Ppa.10885
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_226091) mRNA, complete cds /cds=p(376,2322) /gb=XM_001782852
Ppa.19379
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_59175) mRNA, complete cds /cds=p(1,1899) /gb=XM_001772365
Ppa.20676
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_189058) mRNA, complete cds /cds=p(1,2055) /gb=XM_001770594
Pth.5702
WS02548.C21_M17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02548_M17 3', mRNA sequence /clone=WS02548_M17 /clone_end=3' /gb=DT491791

Domain Architecture

DnaJ PF00226 74197
DomainStartEndBit scoreE-value
DnaJ88167822.1e-21
Myb_DNA-binding57562426.98.3e-05

Sequences