Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 74221

Identification

Species:
Coccomyxa sp. C-169
Gene model
74221
Description
fgeneshCV_pg.C_scaffold_10000024
Family
FHA
3D structure (top 5)
3GMB 3C96 2QA1 2QA2 1PN0
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

496897 Score: 1

Arabidopsis thaliana

AT5G67030.1 Score: 1

Chlorella sp. NC64A

138731 Score: 1

Carica papaya

evm.TU.supercontig_55.145 Score: 1

Chlamydomonas reinhardtii

53522 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g37619.1 Score: 1

Physcomitrella patens

186228 Score: 1

Populus trichocarpa

760467 Score: 1

Sorghum bicolor

4887748 Score: 1

Selaginella moellendorffii

172667 Score: 1

Vitis vinifera

GSVIVP00019494001 Score: 1

Zea mays

GRMZM2G127139_P01 Score: 1

Expression data

Expressed Sequence Tags

At.23748
Arabidopsis thaliana zeaxanthin epoxidase precursor (At5g67030) mRNA, complete cds /cds=p(89,1600) /gb=AY081304
Cre.4329
Chlamydomonas reinhardtii zeaxanthin epoxidase precursor (ZEP1) mRNA, complete cds; nuclear gene for chloroplast product /cds=p(93,2384) /gb=AY212923
Mtr.16994
s13dNF48B01GS013_466504 Germinating Seed Medicago truncatula cDNA, mRNA sequence /gb=CX541601
Os.1605
Oryza sativa Japonica Group OsABA2 mRNA for zeaxanthin epoxidase, complete cds /cds=p(172,2052) /gb=AB050884
Ppa.8253
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_186228) mRNA, complete cds /cds=p(1,2007) /gb=XM_001767149
Ptp.4828
UL67E08.5pR Populus cold stressed leaves cDNA library Populus tremula x Populus tremuloides cDNA clone UL67E08 5', mRNA sequence /clone=UL67E08 /clone_end=5' /gb=DN500605
Vvi.1307
Vitis vinifera zeaxanthin epoxidase (ZEP) mRNA, complete cds /cds=p(26,2002) /gb=AY337615

Domain Architecture

FAD_binding_3 PF01494 74221
DomainStartEndBit scoreE-value
FAD_binding_310365-127.50.00044
FHA51458161.72.7e-15

Sequences