Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 754616

Identification

Species:
Populus trichocarpa
Gene model
754616
Description
fgenesh4_pg.C_LG_II000796
Family
CSD
3D structure (top 5)
1MJC 3CAM 1H95 2YTY 1C9O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G21060.1 Score: 1

Carica papaya

evm.TU.supercontig_36.18 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g03520.1 Score: 1

Physcomitrella patens

180264 Score: 1
183211 Score: 1

Populus trichocarpa

556614 Score: 1
754616 Score: 1

Sorghum bicolor

4762440 Score: 1

Vitis vinifera

GSVIVP00015337001 Score: 1

Populus trichocarpa

556614 Score: 1
754616 Score: 1

Zea mays

GRMZM2G090076_P01 Score: 1
GRMZM2G179385_P01 Score: 1

Expression data

Expressed Sequence Tags

At.1680
45-L021843-065-003-A03S-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 003-A03, mRNA sequence /clone=003-A03 /gb=DR750668
Os.4724
Oryza sativa Japonica Group cDNA clone:J023061H10, full insert sequence /gb=AK070711
Os.54054
Oryza sativa Japonica Group cDNA, clone: J100044F18, full insert sequence /gb=AK243227

Domain Architecture

CSD PF00313 754616
DomainStartEndBit scoreE-value
CSD673125.31.8e-34
zf-CCHC121138331e-06
zf-CCHC16318041.23.7e-09

Sequences