Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 75510

Identification

Species:
Coccomyxa sp. C-169
Gene model
75510
Description
fgeneshCV_pg.C_scaffold_14000165
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473420 Score: 1

Arabidopsis thaliana

AT1G32330.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g08140.1 Score: 1

Populus trichocarpa

757199 Score: 1

Sorghum bicolor

5049892 Score: 1

Vitis vinifera

GSVIVP00015710001 Score: 1

Zea mays

GRMZM2G118485_P01 Score: 1
GRMZM2G118485_P02 Score: 1
GRMZM2G178310_P01 Score: 1
GRMZM2G178310_P02 Score: 1
GRMZM2G026742_P01 Score: 0.94
GRMZM2G026742_P02 Score: 0.94
GRMZM2G026742_P03 Score: 0.94
GRMZM2G026742_P04 Score: 0.94

Expression data

Expressed Sequence Tags

Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055

Domain Architecture

HSF_DNA-bind PF00447 75510
DomainStartEndBit scoreE-value
HSF_DNA-bind11631513.5e-42

Sequences