Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 756017

Identification

Species:
Populus trichocarpa
Gene model
756017
Description
fgenesh4_pg.C_LG_II002197
Family
C2H2
3D structure (top 5)
1NJQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

475716 Score: 1

Arabidopsis thaliana

AT1G66140.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g13600.1 Score: 1
LOC_Os03g13600.2 Score: 1

Sorghum bicolor

4998509 Score: 1

Zea mays

GRMZM2G157197_P01 Score: 1
GRMZM2G157197_P02 Score: 1
GRMZM2G157197_P03 Score: 1
GRMZM2G157197_P04 Score: 1

Expression data

Expressed Sequence Tags

Mtr.9721
EST640676 MTUS Medicago truncatula cDNA clone MTUS-60G11, mRNA sequence /clone=MTUS-60G11 /gb=CA922958
Pba.192
WS02530.B21_N02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_N02 3', mRNA sequence /clone=WS02530_N02 /clone_end=3' /gb=DT486377
Pba.8764
WS02523.BR_H15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_H15 5', mRNA sequence /clone=WS02523_H15 /clone_end=5' /gb=DT478673
Pth.192
WS02530.B21_N02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_N02 3', mRNA sequence /clone=WS02530_N02 /clone_end=3' /gb=DT486377
Pth.8764
WS02523.BR_H15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_H15 5', mRNA sequence /clone=WS02523_H15 /clone_end=5' /gb=DT478673
Ptp.7839
R037B02.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone R037B02 5', mRNA sequence /clone=R037B02 /clone_end=5' /gb=DN497842
Vvi.9162
VV_PEd0014d07.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV240780

Domain Architecture

zf-C2H2 PF00096 756017
DomainStartEndBit scoreE-value
zf-C2H28310519.50.013

Sequences