Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 761071

Identification

Species:
Populus trichocarpa
Gene model
761071
Description
fgenesh4_pg.C_LG_V001123
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

496690 Score: 1

Populus trichocarpa

761071 Score: 1.041
643452 Score: 1

Arabidopsis thaliana

AT5G50080.1 Score: 1

Carica papaya

evm.TU.supercontig_49.92 Score: 1

Vitis vinifera

GSVIVP00031737001 Score: 1

Expression data

Expressed Sequence Tags

Pba.6678
WS02538.B21_E05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02538_E05 3', mRNA sequence /clone=WS02538_E05 /clone_end=3' /gb=DT489088
Pth.6678
WS02538.B21_E05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02538_E05 3', mRNA sequence /clone=WS02538_E05 /clone_end=3' /gb=DT489088

Domain Architecture

AP2 PF00847 761071
DomainStartEndBit scoreE-value
AP221726880.36.3e-21

Sequences

protein sequence
transcript sequence