Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 770597

Identification

Species:
Populus trichocarpa
Gene model
770597
Description
fgenesh4_pg.C_LG_X002087
Family
C2H2
3D structure (top 5)
1TF6 2CSH 2DLQ 2I13 1X6H
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os02g57790.1 Score: 1

Sorghum bicolor

5005985 Score: 1

Zea mays

GRMZM2G038291_P01 Score: 1
GRMZM2G088917_P01 Score: 1
GRMZM2G140033_P01 Score: 1

Expression data

Expressed Sequence Tags

Ptp.12454
R025G08.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone V060G08 5', mRNA sequence /clone=V060G08 /clone_end=5' /gb=DN497685
Vvi.12012
SCB03919 Inflorescence with GA3 (VvS12) Vitis vinifera cDNA clone SCB03919, mRNA sequence /clone=SCB03919 /gb=EE106945

Domain Architecture

zf-C2H2 PF00096 770597
DomainStartEndBit scoreE-value
zf-C2H2123145190.018
zf-C2H219021220.90.0047

Sequences