Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 79033

Identification

Species:
Coccomyxa sp. C-169
Gene model
79033
Description
estExt_fgeneshCV_kg.C_90091
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlorella sp. NC64A

24455 Score: 1

Carica papaya

evm.TU.supercontig_18.45 Score: 1

Ostreococcus lucimarinus

7951 Score: 1

Ostreococcus tauri

6642 Score: 1

Zea mays

GRMZM2G063030_P02 Score: 1
GRMZM2G137866_P01 Score: 0.904

Expression data

Expressed Sequence Tags

At.3858
Arabidopsis thaliana EZA1 (SWINGER); transcription factor (EZA1) mRNA, complete cds /cds=p(94,2664) /gb=NM_116433
Hv.20522
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf111g10, mRNA sequence /gb=AK251149
Os.44686
Oryza sativa (japonica cultivar-group) Os06g0275500 (Os06g0275500) mRNA, complete cds /cds=p(294,2984) /gb=NM_001063914
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Ppa.1646
Physcomitrella patens subsp. patens polycomb group protein (SDG1501) mRNA, complete cds /cds=p(165,2843) /gb=XM_001768136
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876

Domain Architecture

SET PF00856 79033
DomainStartEndBit scoreE-value
SET86214157.34.7e-44

Sequences