Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 814069

Identification

Species:
Populus trichocarpa
Gene model
814069
Description
estExt_fgenesh4_kg.C_LG_IX0001
Family
CCAAT
3D structure (top 5)
1JFI 1N1J 2BYK 1TZY 2HUE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481647 Score: 1

Cyanidioschyzon merolae

CMR360C Score: 1

Micromonas sp. RCC299

60106 Score: 1

Ostreococcus lucimarinus

32755 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g39490.1 Score: 1

Physcomitrella patens

91907 Score: 1

Selaginella moellendorffii

88436 Score: 1

Vitis vinifera

GSVIVP00037347001 Score: 1

Zea mays

GRMZM2G012654_P01 Score: 1

Expression data

Expressed Sequence Tags

Mtr.11105
NF083B06FL1F1048 Developing flower Medicago truncatula cDNA clone NF083B06FL 5', mRNA sequence /clone=NF083B06FL /clone_end=5' /gb=BQ148843
Pba.4913
WS01121.BR_H08 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01121_H08 5', mRNA sequence /clone=WS01121_H08 /clone_end=5' /gb=DT495778
Pth.4913
Populus trichocarpa clone WS0115_E10 unknown mRNA /cds=p(32,469) /gb=EF146061
Ptp.2536
A030P09.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone A030P09 3', mRNA sequence /clone=A030P09 /clone_end=3' /gb=CK088005

Domain Architecture

CBFD_NFYB_HMF PF00808 814069
DomainStartEndBit scoreE-value
CBFD_NFYB_HMF118242.31.7e-09
NF-YB13106125.91.9e-37

Sequences