Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 822181

Identification

Species:
Populus trichocarpa
Gene model
822181
Description
estExt_fgenesh4_pg.C_LG_X1245
Family
BSD

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472789 Score: 1
894683 Score: 1

Populus trichocarpa

564448 Score: 1
822181 Score: 1

Arabidopsis thaliana

AT1G26300.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g49450.1 Score: 1

Physcomitrella patens

184063 Score: 1

Sorghum bicolor

5055641 Score: 1

Selaginella moellendorffii

99276 Score: 1

Zea mays

GRMZM2G127548_P01 Score: 1
GRMZM2G128368_P01 Score: 1

Expression data

Expressed Sequence Tags

At.26503
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-05-E04 /cds=p(13,441) /gb=AK176184
At.27528
Arabidopsis thaliana unknown protein (AT1G69030) mRNA, complete cds /cds=p(1,954) /gb=NM_105574
Mtr.10541
MTYD165TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256855
Vvi.5990
WIN032.C21_P16 Cab Sauv seed normalized (WIN03) Vitis vinifera cDNA clone WIN032_P16 3', mRNA sequence /clone=WIN032_P16 /clone_end=3' /gb=EC928383

Domain Architecture

BSD PF03909 822181
DomainStartEndBit scoreE-value
BSD13820462.91.1e-15

Sequences