Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 827108

Identification

Species:
Populus trichocarpa
Gene model
827108
Description
estExt_fgenesh4_pg.C_570205
Family
BES1
3D structure (top 5)
1TWF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os07g39220.1 Score: 1

Sorghum bicolor

5051904 Score: 1

Vitis vinifera

GSVIVP00024996001 Score: 1

Zea mays

GRMZM2G102514_P01 Score: 1

Expression data

Expressed Sequence Tags

At.22285
Arabidopsis thaliana brassinosteroid signalling positive regulator-related (AT4G36780) mRNA, complete cds /cds=p(131,640) /gb=NM_119842
At.24276
Arabidopsis thaliana BES1 (BRI1-EMS-SUPPRESSOR 1) (BES1) mRNA, complete cds /cds=p(215,1222) /gb=NM_202136
At.28634
Arabidopsis thaliana BZR1 (BRASSINAZOLE-RESISTANT 1) (BZR1) mRNA, complete cds /cds=p(206,1216) /gb=NM_202416
At.35459
Arabidopsis thaliana brassinosteroid signalling positive regulator-related (AT3G50750) mRNA, complete cds /cds=p(173,1003) /gb=NM_114935
Mtr.2357
Medicago truncatula clone MTYF5_F6_F7_F81G-D-20 unknown mRNA /cds=p(112,1059) /gb=BT051657
Mtr.9038
EST645979 HOGA Medicago truncatula cDNA clone HOGA-27G7, mRNA sequence /clone=HOGA-27G7 /gb=CB893187
Os.54781
Oryza sativa Japonica Group cDNA clone:002-115-C06, full insert sequence /cds=p(61,957) /gb=AK106748
Pba.164
WS02532.B21_O03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_O03 3', mRNA sequence /clone=WS02532_O03 /clone_end=3' /gb=DT487138
Pba.335
WS0126.B21_M10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0126_M10 3', mRNA sequence /clone=WS0126_M10 /clone_end=3' /gb=CV238467
Pth.15381
WS02512.B21_I16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02512_I16 3', mRNA sequence /clone=WS02512_I16 /clone_end=3' /gb=CV241552
Pth.164
Populus trichocarpa clone PX0011_E05 unknown mRNA /cds=p(82,1035) /gb=EF144216
Pth.335
Populus trichocarpa clone WS0126_M10 unknown mRNA /cds=p(116,1111) /gb=EF148014
Ptp.6379
G067P51.5pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G067P51 5', mRNA sequence /clone=G067P51 /clone_end=5' /gb=CK102174
Vvi.14583
CAB20007_IVa_Fa_D07 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20007_IVa_Fa_D07 5', mRNA sequence /clone=CAB20007_IVa_Fa_D07 /clone_end=5' /gb=CF211201
Vvi.23714
S9B08590 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B08590, mRNA sequence /clone=S9B08590 /gb=EE101009
Vvi.260
WIN1140.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1140_D07 3', mRNA sequence /clone=WIN1140_D07 /clone_end=3' /gb=EC990653

Domain Architecture

DUF822 PF05687 827108
DomainStartEndBit scoreE-value
DUF8225160296.55.1e-86

Sequences