Gene model: 834586

Species: Populus trichocarpa Gene model 834586 Description estExt_fgenesh4_pm.C_LG_XIII0293 Family Sigma70-like 3D structure (top 5) 2A6H 1RP3 1SIG 1L0O 1L9Z
	PDB entry: 2A6H 1RP3 1SIG 1L0O 1L9Z 1KU3 1TLH 1TTY 1OR7 2P7V 2Q1Z 1S7O 1XSV

• JGI/DOE

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470915 Score: 1

Populus trichocarpa

780378 Score: 1
834586 Score: 1

Populus trichocarpa

780378 Score: 1
834586 Score: 1

Arabidopsis thaliana

AT1G08540.1 Score: 1

Carica papaya

evm.TU.supercontig_73.28 Score: 1

• NCBI EST Profile Viewer (UniGene: At.23349)
• NCBI EST Profile Viewer (UniGene: Hv.20577)
• NCBI EST Profile Viewer (UniGene: Hv.27771)
• NCBI EST Profile Viewer (UniGene: Mtr.9120)
• NCBI EST Profile Viewer (UniGene: Os.28459)
• NCBI EST Profile Viewer (UniGene: Ptp.11516)
• NCBI EST Profile Viewer (UniGene: Vvi.15436)

At.23349

Arabidopsis thaliana sigma factor 2 (SIG2) mRNA, nuclear gene encoding chloroplast protein, complete cds /cds=p(15,1739) /gb=AF015543

Hv.20577

Hordeum vulgare subsp. vulgare cDNA clone: FLbaf170f11, mRNA sequence /gb=AK252843

Hv.27771

BJ481686 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah61h18 5', mRNA sequence /clone=bah61h18 /clone_end=5' /gb=BJ481686

Mtr.9120

EST457795 DSIL Medicago truncatula cDNA clone pDSIL-23E14, mRNA sequence /clone=pDSIL-23E14 /gb=BF520325

Os.28459

Oryza sativa Japonica Group cDNA clone:J013054G24, full insert sequence /gb=AK066099

Ptp.11516

C052P11.3pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C052P11 3', mRNA sequence /clone=C052P11 /clone_end=3' /gb=CK089965

Vvi.15436

WIN021.C21_B06 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN021_B06 3', mRNA sequence /clone=WIN021_B06 /clone_end=3' /gb=EC923412

protein sequence
transcript sequence