Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 835248

Identification

Species:
Populus trichocarpa
Gene model
835248
Description
estExt_fgenesh4_pm.C_LG_XV0337
Family
LFY
3D structure (top 5)
2VY1
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

886426 Score: 1

Arabidopsis thaliana

AT5G61850.1 Score: 1

Carica papaya

evm.TU.supercontig_13.169 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g51000.1 Score: 1

Physcomitrella patens

163123 Score: 1
164706 Score: 0.928

Sorghum bicolor

4985192 Score: 1

Vitis vinifera

GSVIVP00018048001 Score: 1

Zea mays

GRMZM2G098813_P02 Score: 1

Expression data

Expressed Sequence Tags

At.55671
Arabidopsis thaliana LFY (LEAFY); transcription factor (LFY) mRNA, complete cds /cds=p(1,1263) /gb=NM_125579
Mtr.10796
Medicago truncatula Unifoliata protein (Uni) mRNA, complete cds /cds=p(11,1189) /gb=AY928184
Os.57558
Oryza sativa mRNA for RFL gene, complete cds /cds=p(76,1245) /gb=AB005620
Ppa.164
Physcomitrella patens subsp. patens PPLFY2 mRNA for FLORICAULA/LEAFY homolog 2, complete cds /cds=p(363,1412) /gb=AB052252
Ppa.165
Physcomitrella patens subsp. patens PPLFY1 mRNA for FLORICAULA/LEAFY homolog 1, complete cds /cds=p(4,1050) /gb=AB052251
Pth.11560
PTRI21.3pR Populus cDNA, trichocarpa shoot library Populus trichocarpa cDNA clone PTRI21 3', mRNA sequence /clone=PTRI21 /clone_end=3' /gb=DN484119

Domain Architecture

FLO_LFY PF01698 835248
DomainStartEndBit scoreE-value
FLO_LFY1364920.47.8e-274

Sequences